Fluorescent bacterial biosensor E.
coli/pTdcR-TurboYFP sensitive to terahertz
radiation DANIL S. SERDYUKOV, TATIANA N. GORYACHKOVSKAYA,
IRINA A. MESCHERYAKOVA, SERGEI A. KUZNETSOV,
VASILIY M. POPIK, SERGEY E. PELTEK BIOMED OPT EXPRESS, 2021
PheLiGe: an interactive database of billions of human genotype-phenotype associations Shashkova TI, Pakhomov ED, Gorev DD, Karssen LC, Joshi PK, Aulchenko YS NUCLEIC ACIDS RES, 2021, 49(D1):D1347-D1350
Essential Oils from Different Parts of the Sea Buckthorn Hippophae rhamnoides L. Nikolay M. Slynko, Leonid V. Kuibida, Ludmila E. Tatarova, George U. Galitsyn,
Tatiana N. Goryachkovskaya, Sergey E. Peltek Advances in Bioscience and Biotechnology, 2021, 2019, 10, 233-243
Пангеномы сельскохозяйственных растений Пронозин А.Ю., Брагина М.К., Салина Е.А. Vavilov journal of genetics and breeding, 2021, 2021;25(1):57-63
Introgressive Hybridization of Common Wheat: Results and Prospects Adonina, IG ; Timonova, EM ; Salina, EA RUSS J GENET+, 2021, Volume: 57 Issue: 4 Pages: 390-407
Correlation of Metabolic Profiles of Plasma and Cerebrospinal Fluid of High-Grade Glioma Patients A. D. Rogachev, N. A. Alemasov, V. A. Ivanisenko, N. V. Ivanisenko, E. V. Gaisler, O. S. Oleshko, S. V.
Cheresiz, S. V. Mishinov, V. V. Stupak, A. G. Pokrovsky Metabolites, 2021
The limits of normal approximation for adult height Sergei A. Slavskii
Ivan A. Kuznetsov
Tatiana I. Shashkova
Georgii A. Bazykin
Tatiana I. Axenovich
Fyodor A. Kondrashov
Yurii S. Aulchenko EUR J HUM GENET, 2021, Published: 04 March 2021
Фенотипическая изменчивость селекционных линий мягкой пшеницы (Triticum aestivum L.) по элементам структуры урожая в экологических условиях Западной Сибири и Татарстана Стасюк А.И., Леонова И.Н., Пономарева М.Л., Василова Н.З., Шаманин В.П., Салина Е.А. Сельскохозяйственная биология, 2021, т. 56, №1, с. 78-91
The gene Sr38 for bread wheat breeding in Western Siberia Skolotneva E.S., Kelbin V.N., Shamanin V.P., Boyko N.I., Aparina V.A., Salina E.A. Vavilov journal of genetics and breeding, 2021, Volume: 25 Issue: 7 Pages: 740-745
2020
Технология структурирования и обработки транскриптомных данных на основе гибридного использования RDBMS и NoSQL подходов Мухин А.М., Генаев М.А., Рассказов Д.А., Лашин С.А., Афонников Д.А. Mathematical Biology & Bioinformatics, 2020, Т. 15. No 2. С. 455–470
Genome-wide association study of leaf rust resistance in Russian spring wheat varieties Irina N. Leonova, Ekaterina S. Skolotneva, Elena A. Salina BMC PLANT BIOL, 2020, 2020, 20(Suppl 1):135 https://doi.org/10.1186/s12870-020-02333-3
Effects of Rht17 in combination with Vrn-B1 and Ppd-D1 alleles on agronomic traits in wheat in black earth and non-black earth regions Pavel Yu. Kroupin, Gennady I. Karlov, Ludmila A. Bespalova, Elena A. Salina, Anastasiya G. Chernook, Nobuyoshi Watanabe, Mikhail S. Bazhenov, Vladimir V. Panchenko, Lubov A. Nazarova, Victor Ya. Kovtunenko, Mikhail G. Divashuk BMC PLANT BIOL, 2020, 2020, 20(Suppl 1):304 https://doi.org/10.1186/s12870-020-02514-0
Sex- and age-specific genetic analysis of chronic back pain Freidin M.B., Tsepilov Y.A., Stanaway I.B., Meng W., Hayward C., Smith B.H., Khoury S., Parisien M., Bortsov A., Diatchenko L., Borte S., Winsvold BS, Brumpton BM, Zwart JA, Aulchenko Y.S., Suri P., Williams F.M.K., HUNT All-In Pain PAIN, 2020
Glycosylation of immunoglobulin G is regulated by a large network of genes pleiotropic with inflammatory diseases Klarić, Lucija
Tsepilov, Yakov A.
Stanton, Chloe M.
Mangino, Massimo
Sikka, Timo Tõnis
Esko, Tõnu
Pakhomov, Eugene
Salo, Perttu
Deelen, Joris
McGurnaghan, Stuart J.
Keser, Toma
Vučković, Frano
Ugrina, Ivo
Krištić, Jasminka
Gudelj, Ivan
Štambuk, Jerko
Plomp, Rosina
Pučić-Baković, Maja
Pavić, Tamara
Vilaj, Marija
Trbojević-Akmačić, Irena
Drake, Camilla
Dobrinić, Paula
Mlinarec, Jelena
Jelušić, Barbara
Richmond, Anne
Timofeeva, Maria
Grishchenko, Alexander K.
Dmitrieva, Julia
Bermingham, Mairead L.
Sharapov, Sodbo Zh.
Farrington, Susan M.
Theodoratou, Evropi
Uh, Hae-Won
Beekman, Marian
Slagboom, Eline P.
Louis, Edouard
Georges, Michel
Wuhrer, Manfred
Colhoun, Helen M.
Dunlop, Malcolm G.
Perola, Markus
Fischer, Krista
Polasek, Ozren
Campbell, Harry
Rudan, Igor
Wilson, James F.
Zoldoš, Vlatka
Vitart, Veronique
Spector, Tim
Aulchenko, Yurii S.
Lauc, Gordan
Hayward, Caroline Sci Advances, 2020
Phylogeny of the Eisenia nordenskioldi complex based on mitochondrial genomes Shekhovtsov S.V., Golovanova E.V., Ershov N.I., Poluboyarova T.V., Berman D.I., Bulakhova N.A., Szederjesi T., Peltek S.E. EUR J SOIL BIOL, 2020, V. 96. P. 103137.
Design, Synthesis and Molecular Modeling Study of Conjugates of ADP and Morpholino Nucleosides as A Novel Class of Inhibitors of PARP-1, PARP-2 and PARP-3 Yuliya V. Sherstyuk, Nikita V. Ivanisenko, Alexandra L. Zakharenko, Maria V. Sukhanova,
Roman Y. Peshkov, Ilia V. Eltsov , Mikhail M. Kutuzov, Tatiana A. Kurgina,
Ekaterina A. Belousova, Vladimir A. Ivanisenko, Olga I. Lavrik, Vladimir N. Silnikov and
Tatyana V. Abramova INT J MOL SCI, 2020
Identification of Antimicrobial Peptides from Novel Lactobacillus fermentum Strain. Anna S. Pavlova, Georgii D. Ozhegov, Georgij P. Arapidi, Ivan O. Butenko, Eduard S. Fomin, Nikolai A. Alemasov, Dmitry A. Afonnikov, Dina R. Yarullina, Vadim T. Ivanov, Vadim M. Govorun, Airat R. Kayumov PROTEIN J, 2020, 39, p. 73–84
Dissecting DISC regulation via pharmacological targeting of caspase-8/c-FLIPL heterodimer Laura K. Hillert, Nikita V. Ivanisenko, Denise Busse, Johannes Espe, Corinna König, Sergey E. Peltek, Nikolai A. Kolchanov, Vladimir A. Ivanisenko, Inna N. Lavrik CELL DEATH DIFFER, 2020
Расовый состав новосибирской популяции Puccinia graminis f. sp. tritici Сколотнева Е. С., Кельбин В. Н., Моргунов А. И., Бойко Н. И., Шаманин В.П., Салина Е. А. Микология и фитопатология, 2020, 54 (1): 49-58
Kmasker plants – a tool for assessing complex sequence space in plant species Sebastian Beier, Chris Ulpinnis, Markus Schwalbe, Thomas Münch, Robert Hoffie, Iris Koeppel, Christian Hertig, Nagaveni Budhagatapalli, Stefan Hiekel, Krishna M. Pathi, Goetz Hensel, Martin Grosse, Sindy Chamas, Sophia Gerasimova, Jochen Kumlehn, Uwe Scholz, Thomas Schmutzer PLANT J, 2020, doi:10.1111/tpj.14645
Компьютерное моделирование эволюции микробной популяции: преодоление локальных минимумов при достижении пика на ландшафте приспособленности С. А. Лашин, З. С. Мустафин, А. И. Клименко, Д. А. Афонников, Ю. Г. Матушкин Генетика, 2020, том 56, № 2, с. 234–246
Changes in the proteomic profile of blood serum in coronary atherosclerosis Stakhneva EM, Meshcheryakova IA, Demidov EA, Starostin KV, Peltek SE, Voevoda MI, Ragino YI J MED BIOCHEM, 2020, 39(2):208-214
Learning the changes of barnase mutants thermostability from structural fluctuations obtained using anisotropic network modeling Nikolay A.Alemasov, Nikita V. Ivanisenko, Vladimir A.Ivanisenko J MOL GRAPH MODEL, 2020, Volume 97, June 2020, 107572
A Genome-Scale Metabolic Model of 2,3-Butanediol Production by Thermophilic Bacteria Geobacillus icigianus Kulyashov M., Peltek S.E., Akberdin I.R. Microorganisms, 2020, 8(7), 1002
Dissection of novel candidate genes for grain texture in Russian wheat varieties Kiseleva A.A., Leonova I.N., Pshenichnikova T.A., Salina E.A. PLANT MOL BIOL, 2020
Стеблевая ржавчина в Западной Сибири – расовый состав и эффективные гены устойчивости В.П. Шаманин, И.В. Потоцкая, С.С. Шепелев, В.Е. Пожерукова, Е.А. Салина, Е.С. Сколотнева, Д. Ходсон, М. Хоумвёллер, М. Патпур, А.И. Моргунов Vavilov journal of genetics and breeding, 2020, 24(2):131-138
Создание линии табака со сниженными антифидантными свойствами по отношению к колорадскому жуку. Костина Н.Е., Спасельникова А.В., Егорова А. А., Колосовская Е.В., Домрачев Д.В., Романова А.В., Туманян С.Р., Хамас С., Кумлен Й., Дубовский И.М., Герасимова С.В. Биология в сельском хозяйстве, 2020, Т.3(1) 2020 г
Fold-Change-Specific Enrichment Analysis (FSEA): Quantification of Transcriptional Response Magnitude
for Functional Gene Groups Wiebe D.S., Omelyanchuk N.A., Mukhin A.M., Grosse I., Lashin S.A., Zemlyanskaya E.V., Mironova V.V. Genes, 2020, 11(4): 434
Phylogeography and genetic lineages of Aporrectodea rosea (Lumbricidae, Annelida) Shekhovtsov S.V., Derzhinsky Y.A., Poluboyarova T.V., Golovanova E.V., Peltek S.E. EUR J SOIL BIOL, 2020, V. 99, 103191
Detection of Genomic Regions Associated with Resistance to Stem Rust in Russian Spring Wheat Varieties and Breeding Germplasm. Irina N. Leonova, Ekaterina S. Skolotneva, Elena A. Orlova, Olga A. Orlovskaya, Elena A. Salina INT J MOL SCI, 2020, 2020, 21, 4706
The Phylogeny of Class B Flavoprotein Monooxygenases and the Origin of the YUCCA Protein Family Turnaev I.I., Gunbin K.V., Suslov V.V., Akberdin I.R., Kolchanov N.A., Afonnikov D.A. Plants, 2020, 9(9), 1092
The effect of meditation on comprehension of statements about one-self and others: a pilot ERP and behavioral study Alexander Savostyanov, Sergey Tamozhnikov, Andrey Bocharov, Alexander Saprygin, Yuriy Matushkin, Sergey Lashin, Galina Kolpakova, Klimenty Sudobin, Gennady Knyazev FRONT HUM NEUROSCI, 2020, V 13, Article 437
Анализ цветовых и текстурных характеристик зерен злаков на цифровых изображениях Е.Г. Комышев, М.А. Генаев, Д.А. Афонников Vavilov journal of genetics and breeding, 2020, т. 24, № 4, с. 340-347
Использование гиперспектральной камеры Specim IQ
для анализа растений В.В. Альт, Т.А. Гурова, О.В. Елкин, Д.Н. Клименко, Л.В. Максимов, И.А. Пестунов, О.А. Дубровская,
М.А. Генаев, Т.В. Эрст, К.А. Генаев, Е.Г. Комышев, В.К. Хлесткин, Д.А. Афонников Vavilov journal of genetics and breeding, 2020, т. 24, № 3, с. 259-266
Drought stress tolerance and photosynthetic activity of alloplasmic lines T. dicoccum x T. aestivum. Terletskaya N., Shcherban A., Nesterov M., Perfil’ev R., Salina E., Altayeva N., Blavachinskaya I. INT J MOL SCI, 2020, 21 (9), 3356
ANDDigest: a new web-based module of ANDSystem for the search of knowledge in the scientific literature Timofey V. Ivanisenko, Olga V. Saik, Pavel S. Demenkov, Nikita V. Ivanisenko, Alexander N. Savostianov, Vladimir A. Ivanisenko BMC BIOINFORMATICS, 2020, 21, 228 (2020)
A study on effects of terahertz radiation on gene networks of Escherichia coli by means of fluorescent biosensors DS SERDYUKOV,TN GORYACHKOVSKAYA,IA MESCHERYAKOVA,SV BANNIKOVA,SA KUZNETSOV,OP CHERKASOVA,VM POPIK,SE PELTEK BIOMED OPT EXPRESS, 2020, Vol. 11, No. 9 /1 5258-5273
Virulence Phenotypes of Siberian Wheat Stem Rust Population in 2017–2018 Skolotneva E.S., Kosman E., Patpour M., Kelbin V.N., Morgounov A.I., Shamanin V.P. and Salina E.A. Frontiers in Agronomy, 2020, 2
The role of death domain proteins in host response upon SARS-CoV-2 infection: modulation of programmed cell death and translational applications Nikita V. Ivanisenko, Kamil Seyrek, Nikolay A. Kolchanov, Vladimir A. Ivanisenko, Inna N. Lavrik Cell Death Discovery, 2020
Conversion of hulled into naked barley by Cas endonuclease-mediated knockout of the NUD gene Sophia V. Gerasimova, Christian Hertig, Anna M. Korotkova, Ekaterina V. Kolosovskaya, Ingrid Otto, Stefan Hiekel, Alex V. Kochetov, Elena K. Khlestkina, Jochen Kumlehn BMC PLANT BIOL, 2020
Resequencing and signatures of selection scan in two Siberian native sheep breeds point to candidate genetic variants for adaptation and economically important traits J. Sweet‐Jones, A. A. Yurchenko, A. V. Igoshin, N. S. Yudin, M. T. Swain, D. M. Larkin ANIM GENET, 2020
Quantifying Drosophila adults with the use of a smartphone Evgenia K. Karpova, Evgenii G. Komyshev, Mikhail A. Genaev, Natalya V. Adonyeva, Dmitry A. Afonnikov, Margarita A. Eremina, Nataly E. Gruntenko Biology Open, 2020, 9: bio054452
Распространенность языка жестов в качестве источника данных для генетической эпидемиологии наследуемых форм потери слуха. Романов Г.П., Пшенникова В.Г., Лашин С.А., Соловьев А.В., Терютин Ф.М., Сазонов Н.Н., Хуснутдинова Э.К., Посух О.Л., Федорова С.А., Барашков Н.А. Медицинская генетика, 2020, Т.19. №7(216). 54-56
Young «oil site» of the Uzon Caldera as a habitat for unique microbial life Sergey E. Peltek, Alla V. Bryanskaya, Yuliya E. Uvarova, Aleksey S. Rozanov, Timofey V. Ivanisenko, Vladimir A. Ivanisenko, Elena V. Lazareva, Olga V. Saik, Vadim M. Efimov, Sergey M. Zhmodik, Oxana P. Taran, Nikolay M. Slynko, Sergey V. Shekhovtsov, Valentin N. Parmon, Nikolay L. Dobretsov, Nikolay A. Kolchanov BMC MICROBIOL, 2020, 20, 349
A new approach to estimating the prevalence of hereditary hearing loss: an analysis of the distribution of sign language users based on census data in Russia. Romanov G.P., Pshennikova V.G., Lashin S.A., Solovyev A.V., Teryutin F.M., Cherdonova A.M., Borisova T.V., Sazonov N.N., Khusnutdinova E.K., Posukh O.L., Fedorova S.A., Barashkov N.A. PloS One, 2020, 15(11):e0242219
Pharmacological targeting of c-FLIPL and Bcl-2 family members promotes apoptosis in CD95L-resistant cells. Corinna König, Laura K. Hillert-Richter, Nikita V. Ivanisenko, Vladimir A. Ivanisenko, Inna N. Lavrik SCI REP-UK, 2020
Species Delimitation of the Eisenia nordenskioldi Complex (Oligochaeta, Lumbricidae) Using Transcriptomic Data Sergei V. Shekhovtsov, Aleksandra A. Shipova, Tatiana V. Poluboyarova, Gennady V. Vasiliev, Elena V. Golovanova, Anna P. Geraskina, Nina A. Bulakhova, Tímea Szederjesi, Sergei E. Peltek Frontiers in Genetics, 2020, V. 11, 1508
Морфотипы и генетическая изменчивость Dendrobaena schmidti (Lumbricidae, Annelida) С. В. Шеховцов, И. Б. Рапопорт, Т. В. Полубоярова, А. П. Гераськина, Е. В. Голованова, С. Е. Пельтек Vavilov journal of genetics and breeding, 2020, Т. 24. №. 1. С. 48-54.
Генетическая и размерная изменчивость Octolasion tyrtaeum (Lumbricidae, Annelida) С.В. Шеховцов, С.А. Ермолов, Е.А. Держинский, Т.В. Полубоярова, М.С. Ларичева, С.Е. Пельтек Письма в Вавиловский журнал генетики и селекции, 2020, Т. 6. №. 1. С. 5-9.
Потенциал использования молекулярных маркеров в селекции сои Виниченко Н.А., Салина Е.А., Кочетов А.В. Письма в Вавиловский журнал генетики и селекции, 2020, 6(3):107-125 DOI 10.18699/Letters2020-6-15
Replication of 15 loci involved in human plasma protein N-glycosylation in 4,802 samples from four cohorts Sharapov SZ, Shadrina AS, Tsepilov YA, Elgaeva EE, Tiys ES, Feoktistova SG, Zaytseva OO, Vuckovic F, Cuadrat R, Jäger S, Wittenbecher C, Karssen LC, Timofeeva M, Tillin T, Trbojević-Akmačić I, Štambuk T, Rudman N, Krištić J, Šimunović J, Momčilović A, Vilaj M, Jurić J, Slana A, Gudelj I, Klarić T, Puljak L, Skelin A, Kadić AJ, Van Zundert J, Chaturvedi N, Campbell H, Dunlop M, Farrington SM, Doherty M, Dagostino C, Gieger C, Allegri M, Williams F, Schulze MB, Lauc G, Aulchenko YS. GLYCOBIOLOGY, 2020, cwaa053
Analysis of genetically independent phenotypes identifies shared genetic factors associated with chronic musculoskeletal pain conditions Tsepilov Y. A., Freidin M. B., Shadrina A. S., Sharapov S. Z., Elgaeva E. E., van Zundert J., Karssen L. С., Suri P., Williams F. M. K., Aulchenko Y. S. Commun. biolog., 2020, 3, Article number: 329
The GWAS-MAP platform for aggregation of results of genome-wide association studies and the GWAS-MAP|homo database of 70 billion genetic associations of human traits Shashkova T.I., Gorev D.D., Pakhomov E.D., Shadrina A.S., Sharapov S.Z., Tsepilov Y.A., Karssen L.C., Aulchenko Y.S. Vavilov journal of genetics and breeding, 2020, 24(8):876-884
Prioritization of causal genes for coronary artery disease based on cumulative evidence from experimental and in silico studies Shadrina A. S., Shashkova T. I., Torgasheva A. A., Sharapov S. Z., Klarić L., Pakhomov E. D., Alexeev D. G., Wilson J. F., Tsepilov Y. A., Joshi P. K., Aulchenko Y. S. SCI REP-UK, 2020, 10, Article number: 10486
The mechanism of potato resistance to
Globodera rostochiensis: comparison of root
transcriptomes of resistant and susceptible
Solanum phureja genotypes Alex V. Kochetov, Anastasiya A. Egorova, Anastasiya Y. Glagoleva, Kseniya V. Strygina, Elena K. Khlestkina,
Sophia V. Gerasimova, Natalja V. Shatskaya, Gennady V. Vasilyev, Dmitry A. Afonnikov, Nikolay A. Shmakov,
Olga Y. Antonova, Natalia V. Alpatyeva, Alexander Khiutti, Olga S. Afanasenko and Tatjana A. Gavrilenko BMC PLANT BIOL, 2020, 20(Suppl 1):350
Creation of an online platform for identification of microorganisms: peak picking or full-spectrum analysis Starostin K.V., Demidov E.A., Ershov N.I., Bryanskaya A.V., Efimov V.M., Shlyakhtun V.N., Peltek S.E. Frontiers in Microbiology, 2020
Metagenomics dataset used to characterize microbiome in water and sediments of the lake Solenoe (Novosibirsk region, Russia) Alla V Bryanskaya, Aleksandra A Shipova, Alexei S Rozanov, Oxana A Volkova, Elena V Lazareva, Yulia E Uvarova, Tatyana N Goryachkovskaya, Sergey E Peltek Data in Brief, 2020
Construction of a biosensor sensitive to terahertz radiation based on the glutamine synthetase gene promoter Irina Meshcheryakova, Tatyana Goryachkovskaya, Svetlana Bannikova, Alexey Rozanov, Elizaveta Demidova, Dmitry Oshchepkov, Evgeniy Demidov, Alla Bryanskaya, Nikolay Vinokurov, Vasiliy Popik, Sergey Peltek AIP CONFERENCE PROCEEDINGS, 2020
Metagenomic data on prokaryotic diversity of Kunashir island geothermal spring Alexei S Rozanov, Anton V Korzhuk, Valeria N Shlyakhtun, Aleksandra A Shipova, Sergey E Peltek Data in Brief, 2020
Survival of halophiles of Altai lakes under extreme environmental conditions: implications for the search for Martian life Alla V Bryanskaya, Alexey A Berezhnoy, Alexey S Rozanov, Danil S Serdyukov, Tatyana K Malup, Sergey E Peltek INT J ASTROBIOL, 2020
Diversity and occurrence of methylotrophic yeasts used in genetic engineering Rozanov, A.S., Pershina, E.G., Bogacheva, N.V., Shlyakhtun, V., Sychev, A.A., Peltek, S.E. Vavilov journal of genetics and breeding, 2020, Volume 24, Issue 2, 2020, Pages 149-157
Возможности и перспективы формирования генетической защиты мягкой пшеницы от стеблевой ржавчины в Западной Сибири Кельбин В. Н., Сколотнева Е. С., Салина Е. А. Vavilov journal of genetics and breeding, 2020, №8, Том 24, 821-828
2019
Improved regression model to predict an impact of SOD1 mutations on ALS patients survival time based on analysis of hydrogen bond stability Nikolay A.Alemasov, Nikita V. Ivanisenko, Bhupesh Taneja, Vibha Taneja, Srinivasan Ramachandran, Vladimir A. Ivanisenko J MOL GRAPH MODEL, 2019, Volume 86, January 2019, Pages 247-255
Quantitative characteristics of pubescence in wheat (Triticum aestivum L.) are associated with photosynthetic parameters under conditions of normal and limited water supply Tatyana A. Pshenichnikova, Alexey V. Doroshkov, Svetlana V. Osipova, Alexey V. Permyakov,
Marina D. Permyakova, Vadim M. Efimov, Dmitry A. Afonnikov PLANTA, 2019, №3, V. 243, pp. 839–847
A new version of the ANDSystem tool for automatic extraction of knowledge from scientific publications with expanded functionality for reconstruction of associative gene networks by considering tissue-specific gene expression Vladimir A. Ivanisenko, Pavel S. Demenkov, Timofey V. Ivanisenko, Elena L. Mishchenko, Olga V. Saik BMC BIOINFORMATICS, 2019, BMC Bioinformatics (2019) 20(Suppl 1): 34
MIGREW: database on molecular identification of genes for resistance in wheat Fedor V. Kazantsev, Ekaterina S. Skolotneva, Vasiliy N. Kelbin, Elena A. Salina, Sergey A. Lashin BMC BIOINFORMATICS, 2019, BMC Bioinformatics 2019, 20 (Suppl 1):36
Current achievements in modifying
crop genes using CRISPR/Cas system A.M. Korotkova, S.V. Gerasimova, E.K. Khlestkina. Vavilov journal of genetics and breeding, 2019, 2019;23(1):29-37
Prioritization of genes involved in endothelial cell apoptosis by their implication in lymphedema using an analysis of associative gene networks with ANDSystem Olga V. Saik, Vadim V. Nimaev, Dilovarkhuja B. Usmonov, Pavel S. Demenkov, Timofey V. Ivanisenko, Inna N. Lavrik, Vladimir A. Ivanisenko BMC MED GENOMICS, 2019, BMC Medical Genomics//2019;12(Suppl 2);47:117-140
Genome-wide association study and scan for signatures of selection point to candidate genes for body temperature maintenance under the cold stress in Siberian cattle populations Alexander V. Igoshin, Andrey A. Yurchenko, Nadezhda M. Belonogova, Dmitry V. Petrovsky, Ruslan B. Aitnazarov, Vladimir A. Soloshenko, Nikolay S. Yudin, Denis M. Larkin BMC GENET, 2019
Genome‐wide association study for body weight in cattle populations from Siberia A. V. Igoshin, N. S. Yudin, N. M. Belonogova, D. M. Larkin ANIM GENET, 2019
Системный подход к моделированию развития листостебельных грибных инфекций пшеницы Николаев С.В., Зубаирова У.С., Сколотнева Е.С., Орлова Е.А., Афонников Д.А. Vavilov journal of genetics and breeding, 2019, 23(1):100-109
Delineating the role of c-FLIP/NEMO interaction in the CD95 network via rational design of molecular probes Nikita V. Ivanisenko, Jörn H. Buchbinder, Johannes Espe, Max Richter, Miriam Bollmann, Laura K. Hillert, Vladimir A. Ivanisenko, Inna N. Lavrik BMC GENOMICS, 2019
Progress in plant genome sequencing: research directions M.K. Bragina, D.A. Afonnikov, E.A. Salina Vavilov journal of genetics and breeding, 2019, 2019;23(1):38-48
New insights from Opisthorchis felineus genome: update on genomics of the epidemiologically important liver flukes Nikita I. Ershov, Viatcheslav A. Mordvinov, Egor B. Prokhortchouk, Mariya Y. Pakharukova, Konstantin V. Gunbin, Kirill Ustyantsev, Mikhail A. Genaev, Alexander G. Blinov, Alexander Mazur, Eugenia Boulygina, Svetlana Tsygankova, Ekaterina Khrameeva, Nikolay Chekanov, Guangyi Fan, An Xiao, He Zhang, Xun Xu, Huanming Yang, Victor Solovyev, Simon Ming-Yuen Lee, Xin Liu, Dmitry A. Afonnikov, Konstantin G. Skryabin BMC GENOMICS, 2019, 20:399
Spatial heterogeneity promotes antagonistic evolutionary scenarios in microbial community explained by ecological stratification: a simulation study Klimenko A.I., Matushkin Y.G., Kolchanov N.A., Lashin S.A. ECOL MODEL, 2019, V 399, p.66-76
Оценка количественных характеристик клубнеобразования
дикого картофеля на основе анализа изображений клубней
с использованием компьютерного приложения SeedСounter К.А. Иванова, Е.Г. Комышев, М.А. Генаев, А.А. Егорова, К.А. Колошина, Н.А. Чала,
Д.А. Афонников, А.В. Кочетов, Е.В. Рогозина, С.В. Герасимова Vavilov journal of genetics and breeding, 2019, 2019. Онлайн.
The evolution of gene regulatory networks controlling Arabidopsis thaliana L. trichome development. Doroshkov AV, Konstantinov DK, Afonnikov DA, Gunbin KV. BMC PLANT BIOL, 2019
Germline-restricted chromosome (GRC) is widespread among songbirds Torgasheva AA, Malinovskaya LP, Zadesenets KS, Karamysheva TV, Kizilova EA, Akberdina EA, Pristyazhnyuk IE, Shnaider EP, Volodkina VA, Saifitdinova AF,Galkina SA, Larkin DM, Rubtsov NB, Borodin PM. 2019, 116: 11845-11850. P NATL ACAD SCI USA, 2019, 116: 11845-11850.
Использование миРНК в качестве диагностических маркеров острого инфаркта миокарда и ремоделирования сердечной мышцы. Иванощук Д.Е., Розанов А.С., Орлов П.С., Михайлова С.В., Шахтшнейдер Е.В., Кручинина М.В., Воевода М.И. Атеросклероз, 2019, Том 15.- №2. – с. 68-77.
Приоритизация генов картофеля, вовлеченных в формирование селекционно-значимых признаков, с использованием базы знаний SOLANUM TUBEROSUM. Деменков П.С., Сайк О.В., Иванисенко Т.В., Колчанов Н.А., Кочетов А.В., Иванисенко В.А. Vavilov journal of genetics and breeding, 2019, 23(3):312-319
Identification of 12 genetic loci associated with human healthspan Zenin A, Tsepilov Y, Sharapov S, Getmantsev E, Menshikov LI, Fedichev PO, Aulchenko Y Commun. biolog., 2019, 2
Defining the genetic control of human blood plasma N-glycome using genome-wide association study Sharapov S, Tsepilov Y, Klaric L, Mangino M, Thareja G, Shadrina A, Simurina M, Dagostino C, Dmitrieva J, Vilaj M, Vuckovic F, Pavic T, Stambuk J, Trbojevic-Akmacic I, Kristic J, Simunovic J, Momcilovic A, Campbell H, Doherty M, Dunlop M, Farrington S, Pucic-Bakovic M, Gieger C, Allegri M, Louis E, Georges M, Suhre K, Spector T, Williams F, Lauc G, Aulchenko Y HUM MOL GENET, 2019
Morphometry of the Wheat Spike by Analyzing 2D Images Mikhail A. Genaev, Evgenii G. Komyshev, Nikolai V. Smirnov, Yuliya V. Kruchinina,
Nikolay P. Goncharov and Dmitry A. Afonnikov Agronomy, 2019, 0, 9, 390
Resistance mechanisms involved in complex immunity
of wheat against rust diseases E.S. Skolotneva , E.A. Salina Vavilov journal of genetics and breeding, 2019, 2019, 23 (5): 542 -550
Reconstruction and Analysis of Gene Networks of Human Neurotransmitter Systems Reveal Genes with Contentious Manifestation for Anxiety, Depression, and Intellectual Disabilities Иванов Роман Артемович
Замятин Владимир
Клименко Александра Игоревна
Матушкин Юрий Георгиевич
Савостьянов Александр Николаевич
Лашин Сергей Александрович Genes, 2019
История «певчей» хромосомы Бородин, П. М.
Торгашева, А. А.
Малиновская, Л. П.
Рубцов, Н. Б.
Галкина, С. А.
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Long and short isoforms of c-FLIP act as control checkpoints of DED filament assembly. Hillert LK, Ivanisenko NV, Espe J, König C, Ivanisenko VA, Kähne T, Lavrik IN ONCOGENE, 2019
Phylostratigraphic Analysis Shows the Earliest Origination of the Abiotic Stress Associated Genes in A. thaliana Zakhar S. Mustafin, Vladimir I. Zamyatin, Dmitrii K. Konstantinov, Aleksej V. Doroshkov, Sergey A. Lashin, Dmitry A. Afonnikov Genes, 2019, Genes 2019, 10(12), 963
The mTOR Signaling Pathway Activity and Vitamin D Availability Control the Expression of Most Autism Predisposition Genes Ekaterina A. Trifonova, Alexandra I. Klimenko, Zakhar S. Mustafin, Sergey A. Lashin, Alex V. Kochetov INT J MOL SCI, 2019, Int. J. Mol. Sci. 2019, 20(24), 6332;
Metagenome-Assembled Genome Sequence of Phormidium sp. Strain SL48-SHIP, Isolated from the Microbial Mat of Salt Lake Number 48 (Novosibirsk Region, Russia) Aleksey S. Rozanov, Aleksandra A. Shipova, Alla V. Bryanskaya,Sergey E. Peltek Microbiol Resour Announc, 2019
Metagenome-Assembled Genome of Halomonas sp. Isolate SL48-SHIP-3 from the Microbial Mat of Salt Lake Number 48 (Novosibirsk Region, Russia) Aleksandra A. Shipova, Anton V. Korzhuk, Valeria Shlyahtun, Alla V. Bryanskaya, Aleksey S. Rozanov, Sergey E. Peltek Microbiol Resour Announc, 2019
Insight into the genetic architecture of back pain and its risk factors from a study of 509,000 individuals Maxim B. Freidin, Yakov A. Tsepilov, Melody Palmer, Lennart C. Karssen, CHARGE Musculoskeletal Working Group, Pradeep Suri, Yurii S. Aulchenko, Frances M.K. Williams PAIN, 2019
Examining causal effects of body mass index on back pain: a Mendelian randomization study Elizaveta E. Elgaeva, Yakov Tsepilov, Maxim B. Freidin, Frances M. K. Williams, Yurii Aulchenko, Pradeep Suri EUR SPINE J, 2019
The development and study of common wheat introgression lines derived from the synthetic form RS7 Davoyan R.O., Bebyakina I.V., Davoyan E.R., Mikov D.S., Zubanova Y.S., Boldakov D.M., Badaeva E.D., Adonina I.G., Salina E.A., Zinchenko A.N. Vavilov journal of genetics and breeding, 2019, 23(7): 827-835
Comorbidity of asthma and hypertension may be mediated by shared genetic dysregulation and drug side effects. Zolotareva O, Saik OV, Königs C, Bragina EY, Goncharova IA, Freidin MB, Dosenko VE, Ivanisenko VA, Hofestädt R. SCI REP-UK, 2019, Nov 8;9(1):16302
Web-Based Computational Tools for the Prediction and Analysis of Posttranslational Modifications of Proteins Ivanisenko VA, Ivanisenko TV, Saik OV, Demenkov PS, Afonnikov DA, Kolchanov NA. Methods in Molecular Biology, 2019, 1934:1-20
The molecular mechanisms driving physiological changes after long duration space flights revealed by quantitative analysis of human blood proteins. Kashirina DN, Percy AJ, Pastushkova LK, Borchers CH, Kireev KS, Ivanisenko VA, Kononikhin AS, Nikolaev EN, Larina IM. BMC MED GENOMICS, 2019, Mar 13;12(Suppl 2):45
Survival of Halophiles of Altai Lakes at Extreme Environmental Conditions: Implications for the Search for Martian Life Bryanskaya A.V., Berezhnoy A.A., Rozanov A.S., Serdyukov D.A., Malup T.K., Peltek S.E. INT J ASTROBIOL, 2019
A novel thermophilic Aeribacillus bacteriophage AP45 isolated from the Valley of Geysers, Kamchatka: genome analysis suggests the existence of a new genus within the Siphoviridae family Morozova V., Bokovaya O., Kozlova Yu., Kurilshikov A., Babkin I., Tupikin A., Bondar A., Ryabchikova E., Bryanskaya A., Peltek S., Tikunova N. EXTREMOPHILES, 2019
Evaluation of cardiovascular system state by urine proteome after manned space flight L Kh Pastushkova, DN Kashirina, AG Brzhozovskiy, AS Kononikhin, ES Tiys, VA Ivanisenko, MI Koloteva, EN Nikolaev, IM Larina ACTA ASTRONAUT, 2019, Том 160, стр. 594-600
Patterns of microchromosome organization remain highly conserved throughout avian evolution. O'Connor RE, Kiazim L, Skinner B, Fonseka G, Joseph S, Jennings R, Larkin DM, Griffin DK. CHROMOSOMA, 2019, 128(1):21-29
Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks Farré M, Kim J, Proskuryakova AA, Zhang Y, Kulemzina AI, Li Q, Zhou Y, Xiong Y, Johnson JL, Perelman PL, Johnson WE, Warren WC, Kukekova AV, Zhang G, O'Brien SJ, Ryder OA, Graphodatsky AS, Ma J, Lewin HA, Larkin DM. GENOME RES, 2019, 29(4):576-589
A Near Chromosome Assembly of the Dromedary Camel Genome. Ruvinskiy D, Larkin DM, Farré M. Frontiers in Genetics, 2019
An integrated chromosome-scale genome assembly of the Masai giraffe (Giraffa camelopardalis tippelskirchi). Farré M, Li Q, Darolti I, Zhou Y, Damas J, Proskuryakova AA, Kulemzina AI, Chemnick LG, Kim J, Ryder OA, Ma J, Graphodatsky AS, Zhang G, Larkin DM, Lewin HA. GigaScience, 2019
Comparative Chromosome Mapping of Musk Ox and the X Chromosome among Some Bovidae Species Proskuryakova AA, Kulemzina AI, Perelman PL, Yudkin DV, Lemskaya NA, Okhlopkov IM, Kirillin EV, Farré M, Larkin DM, Roelke-Parker ME, O'Brien SJ, Bush M, Graphodatsky AS. Genes, 2019
Разработка программного комплекса WebMCOT для поиска совместно встречаемых ДНК-мотивов сайтов связывания транскрипционных факторов Мухин Алексей Максимович, Левицкий Виктор Георгиевич, Лашин Сергей Александрович Вестник НГУ. Серия: Информационные технологии, 2019, Т. 17, №4. C. 74–86
Общие признаки селекции и гены, связанные с адаптацией и акклиматизацией, в геномах российских пород крупного рогатого скота и овец Юдин Н.С., Ларкин Д.М. RUSS J GENET+, 2019, Том 55, № 8, стр. 936-943.
High-density genotyping reveals signatures of selection related to acclimation and economically important traits in 15 local sheep breeds from Russia Yurchenko A.A., Deniskova T.E., Yudin N.S., Dotsev A.V., Khamiruev T.N., Selionova M.I., Egorov S.V., Reyer H., Wimmers K., Brem G., Zinovieva N.A., Larkin D.M. BMC GENOMICS, 2019, Vol.20(Suppl 3):294
Происхождение, селекция и адаптация российских пород крупного рогатого скота по данным полногеномных исследований. Юдин Н.С., Ларкин Д.М. Vavilov journal of genetics and breeding, 2019, Том 23, № 5, стр. 559-568.
